PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94021.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NF-YB
Protein Properties Length: 223aa    MW: 22652.9 Da    PI: 6.7956
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.85.8e-5724119297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 reqdr+lPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+++re+egek
  PON94021.1  24 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFRETEGEK 119
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MADSDNDSGG HNGGTNANSE LSPREQDRLL PIANVSRIMK KALPANAKIS KDAKETVQEC  60
VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFEE YVEPLKIYLQ RFRETEGEKG  120
ASTVAREKDA VGGSVGNGGG GGAYGDGSSG SGGGGGGGGG GGGVYGSGMG MVMMGQQQHH  180
GHVYGSGGFH QVATNSGGGG GIGLGSKTGP GHLSPGSNFG RPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-66NF-YB family protein