PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94105.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 548aa    MW: 61097.1 Da    PI: 5.111
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.43.5e-1321775482374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL +cA+a++++d+  +++l+++l++++s +gdp+qRl ay++e+L a+la+s+s++ykal+++e +   s+e +++++l++e++P++kf+++ aN 
  PON94105.1 177 KGLLCACAKALAENDMLITEWLISELRQMVSVSGDPLQRLGAYMLEGLVAKLASSGSSIYKALRCKEPA---SAELFSYMHLLYEICPYFKFGYMSANG 272
                 568*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI eav+ e++vHiiDf+i qG+QW+ L++aLa++p+gpp++RiTg+++++s   +   le +g rL+++Ae+++vpfef++ +  + +++ele+L v+
  PON94105.1 273 AIAEAVKDESTVHIIDFQIVQGAQWMILIHALATQPGGPPKIRITGIDDSTSAyaRGGGLEVVGLRLSRVAESCNVPFEFHP-INASGSEVELEDLGVR 370
                 *************************************************998899999************************.6999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesv..sleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 pgEa+aVn++++lh+++desv  +++++rd++L+l kslsPkvv++veqe+++n+++F  rf+e+l+yy+a+f+s++ +l+re++eri+vE+++l+r+i
  PON94105.1 371 PGEAIAVNFAMMLHHMPDESVggHTPNHRDRLLRLAKSLSPKVVTLVEQETNTNTAPFYPRFVETLNYYMAVFESIDLTLAREHKERINVEQHCLARDI 469
                 *******************97225666************************************************************************ PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vnv+ac g er+erhe l+kWr+r+++aGF+p+pls  +++++k+llr+++++ y++ee++g l+lgW+++++v+ +aWr
  PON94105.1 470 VNVIACDGPERVERHELLGKWRSRFTMAGFRPYPLSPLVNSTIKTLLRNYSEK-YTLEERDGVLYLGWMEKAMVASCAWR 548
                 ***************************************************65.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MKESKSYRIS NGSHRLSEQQ VEEPESYCWP PIQNLDHLTG TAKGSQDTHL SIKTFEQYCT  60
LESSSGTSSN PVQNSSSSVS FSPDGSPSSQ PETQSYLIDQ HHSPDNVCAS PVSHSCLTDD  120
ADDLMHKIRE LESAMLGTDS DIPEMYNISN EVRKNEVSVE EENISQIMDM ISRRDLKGLL  180
CACAKALAEN DMLITEWLIS ELRQMVSVSG DPLQRLGAYM LEGLVAKLAS SGSSIYKALR  240
CKEPASAELF SYMHLLYEIC PYFKFGYMSA NGAIAEAVKD ESTVHIIDFQ IVQGAQWMIL  300
IHALATQPGG PPKIRITGID DSTSAYARGG GLEVVGLRLS RVAESCNVPF EFHPINASGS  360
EVELEDLGVR PGEAIAVNFA MMLHHMPDES VGGHTPNHRD RLLRLAKSLS PKVVTLVEQE  420
TNTNTAPFYP RFVETLNYYM AVFESIDLTL AREHKERINV EQHCLARDIV NVIACDGPER  480
VERHELLGKW RSRFTMAGFR PYPLSPLVNS TIKTLLRNYS EKYTLEERDG VLYLGWMEKA  540
MVASCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein