PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94207.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 404aa MW: 44625.9 Da PI: 8.4731

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.5	5.9e-35	26	118	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw e+ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+ PON94207.1 26 FLTKTYQLVDDPATDHIVSWGEDDITFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDFFKKGEKHLLCEIH 113 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PON94207.1 114 RRKTA 118 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MAMMLDNSCE GILLSLDSHK SVPAPFLTKT YQLVDDPATD HIVSWGEDDI TFVVWRPPEF 60 ARDLLPNYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFANDF FKKGEKHLLC EIHRRKTAQP 120 QVTALNHLNH HHMSHQYPHH SSSLGPAGFF PAISANRVSL SPPSDSDDQP NWWDSPPRGG 180 GAVTAAAAAG SSAVLAGGNN YNASSAVTAL SEDNERLRRS NSMLMSELAH MRKLYNDIIY 240 FVQNHVKPVA PSNSYNPSSL LVCNAPVVLP SSLTSSGSTN NGSSVQKAPV NNSLGYYYNN 300 NSNNPKQNPH HHHHHQAQQP INSLSPSNTT TSKSSVTILE EPTSNINGGC KTKLFGVPLQ 360 SKKRLHPEYG LNNINIATKM DTNKARLVLE KDDLGLNLMP PSTC

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MAMMLDNSCE GILLSLDSHK SVPAPFLTKT YQLVDDPATD HIVSWGEDDI TFVVWRPPEF  60
ARDLLPNYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFANDF FKKGEKHLLC EIHRRKTAQP  120
QVTALNHLNH HHMSHQYPHH SSSLGPAGFF PAISANRVSL SPPSDSDDQP NWWDSPPRGG  180
GAVTAAAAAG SSAVLAGGNN YNASSAVTAL SEDNERLRRS NSMLMSELAH MRKLYNDIIY  240
FVQNHVKPVA PSNSYNPSSL LVCNAPVVLP SSLTSSGSTN NGSSVQKAPV NNSLGYYYNN  300
NSNNPKQNPH HHHHHQAQQP INSLSPSNTT TSKSSVTILE EPTSNINGGC KTKLFGVPLQ  360
SKKRLHPEYG LNNINIATKM DTNKARLVLE KDDLGLNLMP PSTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-70	HSF family protein