PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94231.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 196aa    MW: 22238.1 Da    PI: 7.0863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.7e-1758106355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  PON94231.1  58 YRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 106
                 9*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEGEECCSSR DTTSTSTITT TSNSNSKRKQ IIQRQQQQHD HETASDDDRR HHQKARTYRG  60
IRMRKWGKWV AEIREPNKRS RIWLGSYTTP VAAARAYDTA VFYLRGPSAR LNFPDLAFQE  120
DLHLADLSAA SIRKRATEVG AKVDADASTQ SALAHHHHHP ASTSPSESNT HHHDHPKPDL  180
NQYPDPDPED SDDQDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.16e-48ERF family protein