PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94344.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ERF

Protein Properties

Length: 404aa MW: 45327.7 Da PI: 4.7205

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.4	1.8e-18	74	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+Wv+eIr+p + + k+ r +lg+f ta eAa a+++a+k+++g PON94344.1 74 CCFRGVRQRT-WGKWVSEIREPHSraTKssKNgSRLWLGTFATAIEAALAYDEAAKAMYG 132 689**999.******666354478779**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MTMEAIGKNR KPRKRRNGSD SVVDTLAKWK KYNHQLSSSP SSSLGGGQEY LKSPAKGSKK 60 GCMRGKGGPQ NSDCCFRGVR QRTWGKWVSE IREPHSRATK SSKNGSRLWL GTFATAIEAA 120 LAYDEAAKAM YGPVALLNFP ENPAADSTGE LTNETVPAES NERGRVEEEL NLVMKHNNNS 180 VPENYDSLEE AGFVQGSLEK QDCFRDTKLN QGRDFSEAAR ISEPSSSTLN EDMERHDFSD 240 AARISEPSAN TLNEDMERDV KEIMLSNGYN GCSRNYDCLQ NEQKSTGYYP ELDFKLEKNV 300 KVEKLENSCG SAGSSSGLDY LQNWATNETF VSDYWDNQSE TPSSHRYELQ TRDGDLSKSL 360 NQMEETYLSS GYNFDFDFLR PGYDFGLSEE QGKLDLWFPE QGEL

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MTMEAIGKNR KPRKRRNGSD SVVDTLAKWK KYNHQLSSSP SSSLGGGQEY LKSPAKGSKK  60
GCMRGKGGPQ NSDCCFRGVR QRTWGKWVSE IREPHSRATK SSKNGSRLWL GTFATAIEAA  120
LAYDEAAKAM YGPVALLNFP ENPAADSTGE LTNETVPAES NERGRVEEEL NLVMKHNNNS  180
VPENYDSLEE AGFVQGSLEK QDCFRDTKLN QGRDFSEAAR ISEPSSSTLN EDMERHDFSD  240
AARISEPSAN TLNEDMERDV KEIMLSNGYN GCSRNYDCLQ NEQKSTGYYP ELDFKLEKNV  300
KVEKLENSCG SAGSSSGLDY LQNWATNETF VSDYWDNQSE TPSSHRYELQ TRDGDLSKSL  360
NQMEETYLSS GYNFDFDFLR PGYDFGLSEE QGKLDLWFPE QGEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38340.1	7e-30	ERF family protein