PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94492.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 334aa    MW: 37636 Da    PI: 4.8798
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2461.3e-14117164354
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                 ykGVr++k +g+++AeIrdp    +r  r +lg+f t+eeA  a+ + ++++e
  PON94492.1 117 YKGVRRRK-WGKYAAEIRDP----IRgGRLWLGTFNTPEEASVAYQKKAREFE 164
                 9****998.**********7....2469*****************99999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MPGIKNDFLN KDLNHKKGKT KKLTKAENYS SSMKRVRIIY HDPYATDSSS EDDEGYDMNK  60
HRSRGSKRFV SEILVPDLSV KSSSPASHSH DNSDKAKFAM SSIPGKVDGT RRSSSMYKGV  120
RRRKWGKYAA EIRDPIRGGR LWLGTFNTPE EASVAYQKKA REFEIMRKVE RERFTKTKSE  180
SESFDLSEKT KDSFVDDASF AKLSLEVAKP LSPSSVLDVS SAAASHGTEV NIKQELCNVE  240
SDCEEEQMVF DMLEEPIISP LETEEFDLGI DKNHPLFEND FDQFFDGADL VNDYTLCGYE  300
NGEAGDLLPL PPLDFDFGMQ GLAWVDETLN MACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-23ERF family protein