PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94560.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 369aa MW: 40672.3 Da PI: 6.5907

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.6e-35	12	103	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 F++k+y++++d+ ++ lisw + +nsf+vld+ +f++++Lp +Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+k+ll++i PON94560.1 12 FVMKTYQMVNDPMTDGLISWGRANNSFIVLDPLDFSRRILPAFFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQKHLLKNIV 99 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rkk+ PON94560.1 100 RKKH 103 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEATTNNVIA PFVMKTYQMV NDPMTDGLIS WGRANNSFIV LDPLDFSRRI LPAFFKHNNF 60 SSFVRQLNTY GFRKVDPDRW EFANEWFLRG QKHLLKNIVR KKHCSSSGSG SSSRLLSHTS 120 SASKHLETEL DDEEIVMEIA RLKQEQRALE EELQGMTKRL ETTERRPQQM MAFLYKVVED 180 PDILPRMMLQ NKHHLTEKKR RLAINSSTTT TTSSNSSGAA VSSSAAAAGT STNNSVKTED 240 DEAGFELESF YHHHQSTSSS PEEPPAPAGW WPGRVFSQEG FYNGFAALSP NPISTVSGGR 300 VGDSMAAAIS SFSAAPPPCY AFGNGNSNSN STNAQIGYFT EVVAGVEPNS PHDPAPVPPY 360 PFSLFGGGF

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEATTNNVIA PFVMKTYQMV NDPMTDGLIS WGRANNSFIV LDPLDFSRRI LPAFFKHNNF  60
SSFVRQLNTY GFRKVDPDRW EFANEWFLRG QKHLLKNIVR KKHCSSSGSG SSSRLLSHTS  120
SASKHLETEL DDEEIVMEIA RLKQEQRALE EELQGMTKRL ETTERRPQQM MAFLYKVVED  180
PDILPRMMLQ NKHHLTEKKR RLAINSSTTT TTSSNSSGAA VSSSAAAAGT STNNSVKTED  240
DEAGFELESF YHHHQSTSSS PEEPPAPAGW WPGRVFSQEG FYNGFAALSP NPISTVSGGR  300
VGDSMAAAIS SFSAAPPPCY AFGNGNSNSN STNAQIGYFT EVVAGVEPNS PHDPAPVPPY  360
PFSLFGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	8e-86	HSF family protein