PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94645.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 272aa    MW: 29191.2 Da    PI: 4.9652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-1873123155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PON94645.1  73 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 123
                 68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MSSTSTTTTT TTTTNTNTEL QLSSETESSS NSFSSGSPPQ SPSSAGSTQL GVSAAAGESK  60
KSVKRIRDSS KHPVYRGVRM RNWGKWVSEI REPRKKSRIW LGTFPTPEMA ARAHDVAALS  120
IKGNSAILNF PQLADSLPRP ASLSPRDVQA AAAKAAQMHD LHAPSSQSQT LLSSSSTSSL  180
SSLVSGMEIS AEYQSEELSE IVELPRLGTS YDSAELANEL VFVDSEEGWV YPPPWLQGVD  240
SFGYLQRDSY ELCGGGSAAT VPESFQGLLW DY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-71ERF family protein