PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94787.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 224aa    MW: 24870 Da    PI: 10.1962
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-054363323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                C  C+ sFs+++ L +Hi +H
  PON94787.1 43 CRLCSLSFSNSYALITHIESH 63
                ******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAGSARNSNQ GNQQGAQQQQ QQQEEARAAA GNNNRARNKQ IACRLCSLSF SNSYALITHI  60
ESHILEEEMI ALRRQNQQPQ DNQSNSLVNS RRNLFIPIPF RPSLPSALYR EAFPMPANSA  120
AAASQKTNPS VPGSGGPNVA QQNKFSQQPN APPQVCSLGE NLVKRGRPEV DYSDPRDGTR  180
PFFSQCDRPI LEPVLPRPKY LEKGIIGEKL DLTLRLWPVM KKTP