PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95038.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 185aa    MW: 20452.6 Da    PI: 10.3303
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.62.4e-214393155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  PON95038.1 43 SHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARSLRG 93
                78********.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MAADTLHHRE TSLSLVPVSP VPPSPAPAPL KEPPQFRGPV KESHFRGVRK RPWGRFAAEI  60
RDPWKKTRKW LGTFDTAEEA ARAYDEAARS LRGPKAKTNF GLAGAHVAAV TAAAPPQSVV  120
VGDCMQYWRQ PVYLPGMAPA VAPPRSEYKG YKLENVDVVV SEQEKKMGKE KKPFLFDLNL  180
PAPLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-23ERF family protein