PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95072.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 220aa    MW: 24733.2 Da    PI: 9.2928
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.7e-053961123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C+++F++   L  H+++H
  PON95072.1 39 YTCSFCKRHFKSAQALGGHMNVH 61
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MERPNLSIGN TIKDKWKCSS DFGTSEYYQC EISWGVKNYT CSFCKRHFKS AQALGGHMNV  60
HRRERARLRL LPPSLPAECS NPNPTLSSLS PSSPAPLSSA KFLPHYGYKP PQYSFPSASL  120
YNALSLPASP SAISTYKDQK SIFDFPPSNN VPLSPEVMRD KTSTTSTTTA DSMRPVRDLQ  180
QKDEYFKALK TEKLIRLDLE MGLLKGQKED VDLELRLGYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.16e-12C2H2 family protein