PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95089.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 749aa MW: 83485.4 Da PI: 6.1536

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	8e-05	580	617	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ +Lq PON95089.1 580 RQLIQDRIKELRELIPSgA------KCSIDSLLERTIKHMLYLQ 617 77899**********77......777778**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MGADLQQILR SLCFNTEWKY AVFWKLKHRA RMMLTWEDAY YDKSEQHDPA ENKCFSKKLE 60 KLHDGLYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVSGKH QWIFADKHEM STCSSFEYSD 120 GWQNQFSAGI RTIAVVAVVP HGVVQLGSYN KVIEDMKLVT HIRDVFMALQ DSSLGHIPSP 180 IQSRMNSSIN LQDMPSESFD SEVIPDCLHN LDKTLNGERP DIWFSIFPYL GKDNDSSYVW 240 SLPGNHQEKA ADVVINRGGL ELPINGADES SKLVQSEANL LDLERHKVIG INLHDNWKCG 300 GEISSCKVTA VGSVNDVSPL SHESVMHDVN LCNVVPAEKV EVDSAHFSSV PIDSALCDRV 360 RLDSVDYYQN GVLHVSEPSD IRFQKDLENL EFLAESSHMD TSSTSLKFPA GYELHEALGP 420 AFLKKSKYFD WEAMKSQGVV SEMPEQMSSS QLTSDSRPEH LLEAVVANVC PSHSDVRSEK 480 SFCKSVQSRL MTENYPEPSS HTTLITDSSN HSIGRASLVG EDTPHCLSSS GVCGATSPKG 540 YSSTCPSACS EQLERSSVPT KNNKKRARPG ENCRPRPRDR QLIQDRIKEL RELIPSGAKC 600 SIDSLLERTI KHMLYLQSIA KHADKLNKYA DVKSHKETSM LESSSYERGS SWAVEVGGNL 660 KVCSIIVENL NKNGQMVVEM MCEECGHFLE IAEAIKSLGL TILKGVTEAH GEKTWICFVV 720 EGQSNRSLHR MDILWSLVQI LQPKNAMQQ

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MGADLQQILR SLCFNTEWKY AVFWKLKHRA RMMLTWEDAY YDKSEQHDPA ENKCFSKKLE  60
KLHDGLYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVSGKH QWIFADKHEM STCSSFEYSD  120
GWQNQFSAGI RTIAVVAVVP HGVVQLGSYN KVIEDMKLVT HIRDVFMALQ DSSLGHIPSP  180
IQSRMNSSIN LQDMPSESFD SEVIPDCLHN LDKTLNGERP DIWFSIFPYL GKDNDSSYVW  240
SLPGNHQEKA ADVVINRGGL ELPINGADES SKLVQSEANL LDLERHKVIG INLHDNWKCG  300
GEISSCKVTA VGSVNDVSPL SHESVMHDVN LCNVVPAEKV EVDSAHFSSV PIDSALCDRV  360
RLDSVDYYQN GVLHVSEPSD IRFQKDLENL EFLAESSHMD TSSTSLKFPA GYELHEALGP  420
AFLKKSKYFD WEAMKSQGVV SEMPEQMSSS QLTSDSRPEH LLEAVVANVC PSHSDVRSEK  480
SFCKSVQSRL MTENYPEPSS HTTLITDSSN HSIGRASLVG EDTPHCLSSS GVCGATSPKG  540
YSSTCPSACS EQLERSSVPT KNNKKRARPG ENCRPRPRDR QLIQDRIKEL RELIPSGAKC  600
SIDSLLERTI KHMLYLQSIA KHADKLNKYA DVKSHKETSM LESSSYERGS SWAVEVGGNL  660
KVCSIIVENL NKNGQMVVEM MCEECGHFLE IAEAIKSLGL TILKGVTEAH GEKTWICFVV  720
EGQSNRSLHR MDILWSLVQI LQPKNAMQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein