PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95148.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Whirly

Protein Properties

Length: 235aa MW: 25573.4 Da PI: 10.1081

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	188.2	1.4e-58	61	196	2	137
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100 v+k+kaal+v +++ptf++ldsg +++r+G ++l++++a++erkydWekkq fals+tev++l++l++ +sceffhdp++ +sn+G+vrk+l+++P++ PON95148.1 61 VFKGKAALSVTPILPTFTKLDSGLHVVERRGVMMLKFIPAIGERKYDWEKKQLFALSPTEVGSLISLGASDSCEFFHDPSMLSSNAGQVRKSLSIKPHS 159 9************************************************************************************************ PP Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 GsG++++l+v n++ k+ +++svP + aefav++++ PON95148.1 160 TGSGYMISLTVVNNVEKSRDNLSVPFTTAEFAVVKTA 196 ********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MTTKLSRLLA SSRNHLSKNI LCGKDGNLSD GLPLHTFTSR AGISTAGQNL GIKGIAAPYT 60 VFKGKAALSV TPILPTFTKL DSGLHVVERR GVMMLKFIPA IGERKYDWEK KQLFALSPTE 120 VGSLISLGAS DSCEFFHDPS MLSSNAGQVR KSLSIKPHST GSGYMISLTV VNNVEKSRDN 180 LSVPFTTAEF AVVKTACSYA LPHILGWDRL TDKVARGHAS NFKSDRQLMD SEWDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	1e-87	Whirly family protein