PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95261.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB
Protein Properties Length: 304aa    MW: 35366.3 Da    PI: 5.7566
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+ +++  g+ R++k+c++rw +yl
       PON95261.1 14 RGPWTIEEDHKLMNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding54.13.7e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++
       PON95261.1  67 RGGFTEVEENQIIQLHSRLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110
                      788*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGGF TEVEENQIIQ LHSRLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKLLG  120
LDPVTHQPIG QHKENDTNKV VEDQDDQPKT LETTTSAESS VDDDHHRSKV EKNSLEKAAK  180
PADDDDQVRE LVPETKEERW NIDGVEQIST EMNYNDVLNI NYETVCQKLD FSTWMEQEMN  240
NNNNNSNNIA YSYSSSLSLE ESNNLSSPTL LADTYVDGSI FSWEGFNYHH HLEQDLFFFQ  300
NTQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.11e-85MYB family protein