PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95279.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 405aa MW: 45916.2 Da PI: 5.31

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.2	3.4e-26	76	158	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rre++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk +++ k + +s +++y+++le PON95279.1 76 WVQEETRSLIGFRREVDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKARHQVKVG--SRSAKMSYYEDLE 158 ******************************************************************98..45568****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MYLSEKTRPV DFYKERGGGE EEESDRDMLM EEVVANGGLA PPQHRNQTQN QMIIGENSSG 60 GEEHEVKAPK KRAETWVQEE TRSLIGFRRE VDGLFNTSKS NKHLWEQISS KMREKGFDRS 120 PTMCTDKWRN LLKEFKKARH QVKVGSRSAK MSYYEDLEEL LRDRNKNNSA TTATATTAAV 180 AAAYKSQTPP KVDSFINFSD KGLEDASIPF GPIEATDRSA VNLERRLDHE GDPLAITAAD 240 AVVASEVPPW NWREAPGNGT ENQSSYCGRI ITVKLGEYSR RIGIEGTSDA IKEAIKSAFR 300 IRTKRAFWLE DEDHVVRSLD RDMPQGNYTL HLDEGITIKL CFYDESNRGS VREEAITLYT 360 EDDFRDFLTR RGFTGLRELG GYRCVDTLDD LQSGAMYQGV RLLVD

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MYLSEKTRPV DFYKERGGGE EEESDRDMLM EEVVANGGLA PPQHRNQTQN QMIIGENSSG  60
GEEHEVKAPK KRAETWVQEE TRSLIGFRRE VDGLFNTSKS NKHLWEQISS KMREKGFDRS  120
PTMCTDKWRN LLKEFKKARH QVKVGSRSAK MSYYEDLEEL LRDRNKNNSA TTATATTAAV  180
AAAYKSQTPP KVDSFINFSD KGLEDASIPF GPIEATDRSA VNLERRLDHE GDPLAITAAD  240
AVVASEVPPW NWREAPGNGT ENQSSYCGRI ITVKLGEYSR RIGIEGTSDA IKEAIKSAFR  300
IRTKRAFWLE DEDHVVRSLD RDMPQGNYTL HLDEGITIKL CFYDESNRGS VREEAITLYT  360
EDDFRDFLTR RGFTGLRELG GYRCVDTLDD LQSGAMYQGV RLLVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-163	Trihelix family protein