PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95361.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 315aa    MW: 35491.6 Da    PI: 5.6996
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.3e-1294140247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47 
                      +rW+  E++ lv++v + G ++W+ +++t g + R++ +c+++w ++
       PON95361.1  94 KRWSRAEEQALVRYVIEKGARNWNQVSQTCGlESRSPSSCRLKWKNL 140
                      69******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSNEDSESNP KKDKDESSII SSTIRSTIEM VFRVLAERVP VQSTPPPNQP PFNLDQRPQK  60
LPPRRFTDEL SPNSNSAAQN LMSLAQGSPK PPAKRWSRAE EQALVRYVIE KGARNWNQVS  120
QTCGLESRSP SSCRLKWKNL ESKFQSDKPT HSTSTRPADQ IDVPVNHQCQ YDVQCYASNH  180
PHQQSSVPVP VDPADVPVDP IDSVSFEDEV KEGEDNTGLP LSPITCKTTW EKIKKSKEPT  240
LLTQELEAKI GILHLEHGNN WSHIADQLPE DISSLDVQKY WESRKKAREN AGIAIYSDEE  300
LQEYIGSVVR KKTEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26950.17e-09MYB family protein