PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95389.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 253aa MW: 28646.3 Da PI: 8.7276

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.2e-05	95	117	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L Hi+ H PON95389.1 95 SCSVCSRVYPTSRLLSIHISEaH 117 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MAMDVEEGQL GFPYWQPVCR RFDPDSPFFA SGNIERELLA KQVAIDLTED EKNYLRSWVA 60 EDSTRGVFCP IAGCGAHLTS LEDFEDHYNK RHTASCSVCS RVYPTSRLLS IHISEAHDSF 120 FQAKVARGYA MYECLVEGCT LKFKSYKSRH QHLVDKHKFP TSFEFFKKAC PSKKLRQKQQ 180 RKQANHKKAE ASSMEVEIET IDGLVSAVSK LSTSDSSPSS ISFGRRNARG LTFVPRAIQR 240 DKRPDSSSAE TKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-111	C2H2 family protein