PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95434.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 238aa MW: 27245.9 Da PI: 9.5697

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.2	4.1e-33	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlsk..k 96 lp G+rF Ptdee++ +yLkkkv++ +l + vi+e+d+++++Pw Lp v +++ yfF++r++ + +k ++r+ sg+Wk kdk ++++ + PON95434.1 14 LPIGYRFCPTDEEVLLHYLKKKVHALPLAA--VIPEFDVFQTDPWGLPGDV---KEKRYFFCNRKRDIVNnNKMHKRVSGSGFWKPISKDKLIVASelN 107 699********************99777..9***********554...4578**9998862556677999**********99888 PP NAM 97 gelvglkktLvfykgra..pkgektdWvmheyrl 128 +++vg++ktLvf +g + + ++t+W+mhey++ PON95434.1 108 NHAVGVRKTLVFRSGGKglLQDSNTRWFMHEYHF 141 999******76441245689******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MEKLEFLTNG GLKLPIGYRF CPTDEEVLLH YLKKKVHALP LAAVIPEFDV FQTDPWGLPG 60 DVKEKRYFFC NRKRDIVNNN KMHKRVSGSG FWKPISKDKL IVASELNNHA VGVRKTLVFR 120 SGGKGLLQDS NTRWFMHEYH FVRSGTIPIN SVHLMNEYYW VVCKVFQKKR RPKREDSSNR 180 KRMRTEGPST PSFSGSSGIT EVSSQSNGGL ELEDHDQEEE SSANNISHCS NSCIREPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	174	QKKRRPKR
2	168	173	KKRRPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-42	NAC family protein