PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95454.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 324aa    MW: 36454.5 Da    PI: 5.9382
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.75.8e-20109209198
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 f+k+l++sdv++++r++lpkk ae+h   ++++e++ + + d++g  +W++k+++  +++s++yvl+ ++ eFv+ +gL+ gDf++ +  ++ +++++v
  PON95454.1 109 FQKELKNSDVSSLRRMILPKKAAEAHlpVLESKEGMVINMDDLDGhHVWSFKYRFwpNNNSRMYVLE-NTGEFVNTHGLRLGDFIMVY--QHiENQHYV 204
                 99**************************66666899*********99******9989999999***9.*****************999..555777777 PP

                 EEEE- CS
          B3  94 vkvfr 98 
                 +++++
  PON95454.1 205 IQAHK 209
                 77665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDQKPAHSRH DLALVTTPQP QADNTSSTRH QLSDPIGLTR DLLATVTHRK KRMPRQRRSS  60
IINLHVLHFP NPRSASASAS SNSHLQADAP DSSLPPACGI DPGSLRFLFQ KELKNSDVSS  120
LRRMILPKKA AEAHLPVLES KEGMVINMDD LDGHHVWSFK YRFWPNNNSR MYVLENTGEF  180
VNTHGLRLGD FIMVYQHIEN QHYVIQAHKK TSDEAQDDDD VVYTDHTTET STAVAMKVEP  240
LCNIDQDYEA NSNTTPSNSL YMNMNCPPVD ETSLSFIYET TNFSNESLLD FLGGSMSHTY  300
SKSNGPFGFE SFGSVDNLSL DDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-74B3 family protein