PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95471.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 222aa    MW: 24989.8 Da    PI: 9.7044
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.53.7e-18182214335
        GATA   3 nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  Cgt +Tp+WR+gp g+k+LCnaCG++yrk+++
  PON95471.1 182 DCGTNSTPMWRKGPLGPKSLCNACGIKYRKQEE 214
                 7*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDDQLREFQM IQEGVIGFSY RRPNNPSGFV DLTLRLGLPP YNYDQNIGQS TQQASLFNQA  60
MQYGCGNINN ANKNYSGPIN HPEKYKPTGA FVGQTSNNGS KRAAESIPYG PFYSTDPYKN  120
AFPPEPDMKN HILLIPSATN INNTTDRTNT RAREGTSRRN KKKRALPAPK NEQEDKRCSN  180
QDCGTNSTPM WRKGPLGPKS LCNACGIKYR KQEERKAEEA NY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.17e-19GATA family protein