PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95515.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 123aa    MW: 13989 Da    PI: 10.6816
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.6e-154109298
                 EEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliy.rkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89 
                  k l +   l+++ l++p++f+++         gg   + ++ ++++++g +W+++l+  r +++r   v ++GW +Fv++ +Lk+gD ++++ +g ++
  PON95515.1   4 TKSL-TLTDLETK-LMVPNDFFRNLfpaqgqgsGGGGGGAVDFMVRNQNGLTWTFRLSNiRTGPDRykLVVSAGWLQFVRDRKLKSGDCLTIYKEGGND 100
                 4444.66666666.999*****877***9999944445889****************777777777668889*********************777677 PP

                 E..EEEEE- CS
          B3  90 felvvkvfr 98 
                 + +++ v r
  PON95515.1 101 RMFRIEVKR 109
                 766666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MVFTKSLTLT DLETKLMVPN DFFRNLFPAQ GQGSGGGGGG AVDFMVRNQN GLTWTFRLSN  60
IRTGPDRYKL VVSAGWLQFV RDRKLKSGDC LTIYKEGGND RMFRIEVKRR ENSKGSYDWT  120
RLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.13e-08ARF family protein