PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95538.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 554aa MW: 59636.6 Da PI: 6.8694

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.2e-09	364	411	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PON95538.1 364 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 411 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MESFKYCMEI QSNELNSSDQ LRDCLFKPNW ESSMDQGDPF ESALSSIVSS PVAATSNAGA 60 GDGVMIRELI GRLGNICNSG EISPQSYMCS NSNSTNTSCY GTPLNSPPKL NLSMADPQIR 120 ASFQIPGAHL PTPPSLAPFS GDPGFAERAA KFSCFGSRNF GGLSGQFGVN ETELPFRSSM 180 PRIESIDKAR QALSVGGSQM VGGHESNKVS LTQNGNSGSD KRTNRVSRSS TPENGGEFGE 240 SREGSSVSDQ IPSGEMSGKL EVEANARKRK AVPRGKAKET PSSSPSVKDA KAAVEIDESN 300 AKRSKKDGAT GNEKDGAAKT KAETEGGKGS GEGNQKQTKE NSKPPEPPKD YIHVRARRGQ 360 ATDSHSLAER VRREKISERM KFLQDLVPGC NKVTGKAVML DEIINYVQSL QRQVEFLSMK 420 LATVNPRMDF NMEALLSKEI FQSRGSLPHA LYPLDSSSMP AAFQFGYNPQ QVPQLHNGIS 480 TASETQFPVN PLNGSMHRAP SMQLPAIDGF AEPPPQGSTF FEDDLQSVVQ MGFGQIQQQG 540 IQGSMTAAQM KVEL

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MESFKYCMEI QSNELNSSDQ LRDCLFKPNW ESSMDQGDPF ESALSSIVSS PVAATSNAGA  60
GDGVMIRELI GRLGNICNSG EISPQSYMCS NSNSTNTSCY GTPLNSPPKL NLSMADPQIR  120
ASFQIPGAHL PTPPSLAPFS GDPGFAERAA KFSCFGSRNF GGLSGQFGVN ETELPFRSSM  180
PRIESIDKAR QALSVGGSQM VGGHESNKVS LTQNGNSGSD KRTNRVSRSS TPENGGEFGE  240
SREGSSVSDQ IPSGEMSGKL EVEANARKRK AVPRGKAKET PSSSPSVKDA KAAVEIDESN  300
AKRSKKDGAT GNEKDGAAKT KAETEGGKGS GEGNQKQTKE NSKPPEPPKD YIHVRARRGQ  360
ATDSHSLAER VRREKISERM KFLQDLVPGC NKVTGKAVML DEIINYVQSL QRQVEFLSMK  420
LATVNPRMDF NMEALLSKEI FQSRGSLPHA LYPLDSSSMP AAFQFGYNPQ QVPQLHNGIS  480
TASETQFPVN PLNGSMHRAP SMQLPAIDGF AEPPPQGSTF FEDDLQSVVQ MGFGQIQQQG  540
IQGSMTAAQM KVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23690.1	1e-70	bHLH family protein