PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95745.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 180aa MW: 20960.4 Da PI: 9.3173

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.6	1.9e-31	99	157	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s+fprsYY+Ct++gC+vkk+++r d+ vv++tYeg H+h+ PON95745.1 99 LDDGYRWRKYGQKTVKNSKFPRSYYKCTYQGCNVKKQIQRLCMDEGVVVTTYEGMHTHS 157 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MENFQMIPSL LSSEMGHARL FAHFSGNNII TDDDHHEMKE EEPKFELHMG NSNNNFGDES 60 GTSFGSERNS KKRSSTKEGK NKVKRHKFAF QTRSQVDVLD DGYRWRKYGQ KTVKNSKFPR 120 SYYKCTYQGC NVKKQIQRLC MDEGVVVTTY EGMHTHSIEK ANENFDHILK RMQNSYTTAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	2e-50	WRKY family protein