PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95901.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 553aa MW: 60428.1 Da PI: 7.07

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.4	3.9e-30	230	289	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ ed +++++tYeg+Hnh+ PON95901.1 230 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCVEDMSILITTYEGTHNHP 289 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MPNSYGSGIE EKRVDSRIGH LADQDHQTNN LVLKKANELE SAKAEMGEVR EENKRLKMVL 60 HHIKKDYESL QLRFFDIVKE DQDLKKPTDH NSNSAHGVDH DHRHRETDEA ELVSLSLGRS 120 PKEPKSSINI VEDTRTNLGK IRDQDHDHHE DDGQDLIKAN LTLGLGSEMQ LTSELVTDPS 180 PENSSELEVK ELAEAKTPKR NNNNGEDEVS QAHAKRARVS VRARCDTPTM NDGCQWRKYG 240 QKIAKGNPCP RAYYRCTVAP SCPVRKQVQR CVEDMSILIT TYEGTHNHPL PVTATAMAST 300 TSAAASMLLS GSSTSHDPIS TVGFTPSKNS SSALNINGPH NSFNLFDTLR TKQFYSPINP 360 ASPLFPTITL DLTTPQVSST SAHFNRSSSF APTSRSGLSF GPTQPNVLQP GWGNGYLSYG 420 PMSYEKAQSP MNGSLNLGKQ AQEYIYQRCA EKMVNNNSQS SSSVQESLTE TLTKAITSDP 480 STFKSVIAAA ISSMVGGGEA HLGRKQDGVE KLGQRLTLGE AATTAGVSHN PLTQNGQLGL 540 ASSYFSRLSS SNF

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MPNSYGSGIE EKRVDSRIGH LADQDHQTNN LVLKKANELE SAKAEMGEVR EENKRLKMVL  60
HHIKKDYESL QLRFFDIVKE DQDLKKPTDH NSNSAHGVDH DHRHRETDEA ELVSLSLGRS  120
PKEPKSSINI VEDTRTNLGK IRDQDHDHHE DDGQDLIKAN LTLGLGSEMQ LTSELVTDPS  180
PENSSELEVK ELAEAKTPKR NNNNGEDEVS QAHAKRARVS VRARCDTPTM NDGCQWRKYG  240
QKIAKGNPCP RAYYRCTVAP SCPVRKQVQR CVEDMSILIT TYEGTHNHPL PVTATAMAST  300
TSAAASMLLS GSSTSHDPIS TVGFTPSKNS SSALNINGPH NSFNLFDTLR TKQFYSPINP  360
ASPLFPTITL DLTTPQVSST SAHFNRSSSF APTSRSGLSF GPTQPNVLQP GWGNGYLSYG  420
PMSYEKAQSP MNGSLNLGKQ AQEYIYQRCA EKMVNNNSQS SSSVQESLTE TLTKAITSDP  480
STFKSVIAAA ISSMVGGGEA HLGRKQDGVE KLGQRLTLGE AATTAGVSHN PLTQNGQLGL  540
ASSYFSRLSS SNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	8e-84	WRKY family protein