PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96036.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 193aa    MW: 21150.9 Da    PI: 9.7837
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-1984117134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  PON96036.1  84 CSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKAR 117
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MMDKINGVDH HDQDQDMMDK ISSLNYNHKG STSSVKWMSS KMRLIQKMSN NNPQTGSTAT  60
TLITDHNSEP HNAISTSITT VRVCSDCNTT STPLWRSGPR GPKSLCNACG IRQRKARRAM  120
AEAAAAANAN LVVTSATTTT TTASYKIKEK KHWRGNLKNK YNPKLLDTSG VFPQDVTEAA  180
LLLMELSCGF VDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.17e-22GATA family protein