PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96065.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 231aa MW: 25984.4 Da PI: 8.9189

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	102.3	4.2e-32	46	156	2	102
HHHHHHHHHCTG...................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSE CS HSF_DNA-bind 2 Flkklyeilede...................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiw 79 Fl+k+y++le++ ++++++sw+ +gn f+v+ ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+++++ w PON96065.1 46 FLSKTYDLLEESggvvlgagagedhhgrkktTTSNIVSWNVEGNGFIVWSLAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKR---------W 133 99******76777777777777777777799***********************************************9998......... PP EEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 80 eFkhksFkkgkkellekikrkks 102 eFkh++F+kg +++l +i rkk PON96065.1 134 EFKHDKFQKGCRHMLVEITRKKC 156 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MAKNEVEAQL AHDDHELINS HGAGHIISAT SSSSGQSPRA KGPAPFLSKT YDLLEESGGV 60 VLGAGAGEDH HGRKKTTTSN IVSWNVEGNG FIVWSLAEFS ELLLPKYFKH NNFSSFIRQL 120 NTYGFKKTSS KRWEFKHDKF QKGCRHMLVE ITRKKCEPSV FPAFLKAAED NAAAAAEENG 180 RLQLMEENKS LRREKMELQT QIAQFKALED KLLDCLAHHM GDNHKKFRRL C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	4e-36	HSF family protein