PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96233.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ERF

Protein Properties

Length: 460aa MW: 49257.7 Da PI: 6.5152

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2.1e-20	220	269	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g PON96233.1 220 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 269 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MCLKVANQRS PNDVSFPPQE QGHGGEDQDE EQDQHNQQQQ GGNIFSQYGV VSPPQPPQQI 60 FTGYSRPTEM SAIVSALTHV VSGRRGGDYW GYDSRLVGDV GSGQVYASPS SSTSSSYSPA 120 FSGITSTGSG SGSWSGQKRG RDEQASAQIR IESAPAPTRV FRGLGDFRAT PEESSSASAT 180 EEVTNTMTAT AAAAATAAIV PGTPSSETAQ QEETGERRRR YRGVRQRPWG KWAAEIRDPH 240 KAARVWLGTF DTAEAAARAY DEAALRFRGN RAKLNFPENV RSFPPPHQNF PVPAPAPTHL 300 SISDSPATLL AAQPNFFRTT PFHGGSSSDT LRDYIQYSQL LQSSGDFHGQ GQHLLQQQIP 360 QQPSSFLEQM LYSSQLASLQ SPLMISSSSS SASSSLLCSS VSSSSSSSSV SYPLLFSSQL 420 HQQQPGFYPS PENQNPATSS AFPAPPWSSP PGFNPPSSSG

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MCLKVANQRS PNDVSFPPQE QGHGGEDQDE EQDQHNQQQQ GGNIFSQYGV VSPPQPPQQI  60
FTGYSRPTEM SAIVSALTHV VSGRRGGDYW GYDSRLVGDV GSGQVYASPS SSTSSSYSPA  120
FSGITSTGSG SGSWSGQKRG RDEQASAQIR IESAPAPTRV FRGLGDFRAT PEESSSASAT  180
EEVTNTMTAT AAAAATAAIV PGTPSSETAQ QEETGERRRR YRGVRQRPWG KWAAEIRDPH  240
KAARVWLGTF DTAEAAARAY DEAALRFRGN RAKLNFPENV RSFPPPHQNF PVPAPAPTHL  300
SISDSPATLL AAQPNFFRTT PFHGGSSSDT LRDYIQYSQL LQSSGDFHGQ GQHLLQQQIP  360
QQPSSFLEQM LYSSQLASLQ SPLMISSSSS SASSSLLCSS VSSSSSSSSV SYPLLFSSQL  420
HQQQPGFYPS PENQNPATSS AFPAPPWSSP PGFNPPSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	221	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	8e-13	ERF family protein