PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96410.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 261aa MW: 29098.2 Da PI: 8.8342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	80	126	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riN f++Lr+l+P a kK++Ka+ L +++ ++k+L PON96410.1 80 KNHSEAEKRRRARINAHFDTLRSLVPGA-----KKMDKASLLAEVISHLKDL 126 58***********************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEPFLWSSSG VSSSWFERRN DGLLANSSLR CGSASSSSLV LGSASSSSLV LDSVRGELVE 60 AHVKLERKGV SAERSMEALK NHSEAEKRRR ARINAHFDTL RSLVPGAKKM DKASLLAEVI 120 SHLKDLKRKA REASEDCVLP KDSDEVKVEP EDELEGRPYS IRVSLSCDYK PGLLSDLRHA 180 LDALHMIIVR AEIVTLGCRM KNVFVMTTCN EDKVEDNEIR RFHAKSICQA LRSVLNKFSA 240 SEELLGNTLS NKRRRVSIFN P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	112	KRRRARINAHFDTLRSLVPGAKKMDK
2	252	256	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	4e-28	bHLH family protein