PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96503.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 435aa MW: 49883.5 Da PI: 4.8839

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4.2e-35	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++++ +++++sws++g sfvv++++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++i+ PON96503.1 14 FLTKTYELVDEPLTDTIVSWSQSGCSFVVWNPTEFAKDLLPMYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLLKNIH 101 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PON96503.1 102 RRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MDASQGSSTA PAPFLTKTYE LVDEPLTDTI VSWSQSGCSF VVWNPTEFAK DLLPMYFKHN 60 NFSSFVRQLN TYGFRKIDPD QWEFANEEFI RGQRHLLKNI HRRKPIHSHS MPIQGHSAPL 120 TDAEKLEYEK EIKRLQYEKN SLQLELQRHE REKQEFELQK QSLNERFQNM EQRQRQLMAS 180 LAELMQKPTF ASILMQQSGN HNKKRRLLNS NNFSDESNMD ENSDWNLQKT NIDRVSAHIL 240 KLDHIEKLEG SLEFWESFLY RIGEEFNSVG LFSQASPVII TEVEHVENNC RTCSPISRLS 300 SPNSFDVRSS PEAPSSENHL DIAGIFSVCL DVDETPKSSG IDMNTSPAGA LEVEASKEQD 360 VGTAEALPAK VNDLFWEQCL TETPGSSDLQ EIQLERNETD DRANDSKTAV HRKDWWNMTN 420 VDNLTTQIGH LTSAI

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MDASQGSSTA PAPFLTKTYE LVDEPLTDTI VSWSQSGCSF VVWNPTEFAK DLLPMYFKHN  60
NFSSFVRQLN TYGFRKIDPD QWEFANEEFI RGQRHLLKNI HRRKPIHSHS MPIQGHSAPL  120
TDAEKLEYEK EIKRLQYEKN SLQLELQRHE REKQEFELQK QSLNERFQNM EQRQRQLMAS  180
LAELMQKPTF ASILMQQSGN HNKKRRLLNS NNFSDESNMD ENSDWNLQKT NIDRVSAHIL  240
KLDHIEKLEG SLEFWESFLY RIGEEFNSVG LFSQASPVII TEVEHVENNC RTCSPISRLS  300
SPNSFDVRSS PEAPSSENHL DIAGIFSVCL DVDETPKSSG IDMNTSPAGA LEVEASKEQD  360
VGTAEALPAK VNDLFWEQCL TETPGSSDLQ EIQLERNETD DRANDSKTAV HRKDWWNMTN  420
VDNLTTQIGH LTSAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-92	HSF family protein