PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96616.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 208aa MW: 23503.8 Da PI: 6.4328

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.7	3.8e-54	36	131	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal tlGf+dy+eplk yl +yrelege+ PON96616.1 36 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALVTLGFDDYAEPLKRYLLRYRELEGER 131 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MVDSIGNNRE REGFNYNNCA SGANSSHEID QDGVIKEQDR LLPIANVGRI MKQILPPNAK 60 ISKEAKETMQ ECVSEFISFV TGEASDKCHK EKRKTVNGDD ICWALVTLGF DDYAEPLKRY 120 LLRYRELEGE RSAHGQNNNN NKGSGIISTN EDVHQKNEIN STNYGGSDHD QVPDQQHIHH 180 QHVHSHNSNI PLKFNVLERS SSSFSRPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	1e-53	NF-YB family protein