PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96707.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

LBD

Protein Properties

Length: 193aa MW: 20328.7 Da PI: 6.8592

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	146.6	6.7e-46	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++lp+++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+++++ PON96707.1 10 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANA 108 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MASSSSYNSP CAACKFLRRK CMPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNELPP 60 HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVQRLQ KELDSANADL IRFACNEIPT 120 TDHLAPPPPP IHPMIGPRQG GGGGGGGGGF YNQPSHGGFS LPYSLPWNDH SGNINEGGEG 180 GGGGGGGGGE GHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	7e-73	LBD family protein