PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96798.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 326aa MW: 36309.4 Da PI: 9.4067

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	206	259	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PON96798.1 206 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 259 9****************************************************7 PP
2	Myb_DNA-binding	47.4	4.3e-15	207	258	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PON96798.1 207 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 258 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MPQKEYKEQQ LSLNRIPDLS LHIRPPNSAP SSICTGRNGA ESEGSAFDIW RKDEAAGEAG 60 GGGLRSSHSD SSIRATRPLA DTQLSLATTI SEAESPWRRR VINSTFPSRE GEESAASARL 120 MINQGFSMLD VSNNSEKQLK PIKGIPIYNT YSFPFSPFDE SSRLRSDGSK FHSHNPQFGI 180 EASDFSNGFR PRFMPKLQNK RNMRAPRMRW TSSLHARFVH AVELLGGHER ATPKSVLELM 240 DVKDLTLAHV KSHLQMYRTV RNTDKPVVSS DGSGEDDILS TTTPHYQNAD CLLNQQQRAN 300 TNAPLSLEQD LAHTSNNLRM SNSSRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	8e-52	G2-like family protein