PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON96960.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 412aa    MW: 45488.2 Da    PI: 5.1489
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON96960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.2e-29228286259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D ++WrKYGqK++kgs +pr+YYrC+s+ gC ++k+vers++d +++++tY+g+H+h+
  PON96960.1 228 TDLWAWRKYGQKPIKGSSYPRNYYRCSSSkGCAARKQVERSNTDVDTFIVTYTGDHTHP 286
                 699************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MAEGWDLYAV VRSCKSTTMT MPTTTTTTTT TAASTSVVSA TTDPTKGGKT TSSEETLSCM  60
ASLTFEEENN PFSFPDTGEP RTNAFQELQE FYMPFFSNNP TTIISGTSAT TQGISDVGGS  120
SSQPRQQVRY DVLQQQLGPQ NDVVGPQFFA QPYLSGFGGL RQKRHQFYEP NQNNQFPQPG  180
ARPLATSTLP LPPLPLTTMP VSETPRPRKR KNQQKRMVCH VSAENLSTDL WAWRKYGQKP  240
IKGSSYPRNY YRCSSSKGCA ARKQVERSNT DVDTFIVTYT GDHTHPRPTH RNSLFGSTHN  300
RLSPVTIAAK HDSSDHQTAA LQSAMSLSTT TPVEQTKEET NNEKQLEDKG GGGCSSSSGE  360
KQVEDILMEE ELMDLENEDD QDDDVLIPNM SLSDDFFLGL KEFDYTPPGA AH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-51WRKY family protein