PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97022.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 574aa MW: 64894.3 Da PI: 8.2303

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.4	4.6e-12	35	123	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 v++ ++ l+++ +++p kfa +g++ s tl+ ++g++W v+l +k +++ ++l +G keF k ++ g +v+F ++g+sef v++++ PON97022.1 35 VMLEKHILEHK-MRIPTKFAMIFGEQ--LSEIATLTVPDGKTWHVRL--KKEREKnIWLLDGFKEFMKYYSIRYGNIVLFIYQGSSEF--SVRICE 123 56666666666.******555644..78899**********..666666689999*******************999999..999986 PP
2	B3	36.2	1.1e-11	491	558	31	98
.--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 31 eesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++s++++l+ + ++W k+ + + +r+ +++GW F+ + +LkegD++vF+l+++ +e l+v ++r PON97022.1 491 RCSTDIQLQAhNEKQRWPAKC--TFTACRVRISQGWGPFAASENLKEGDVCVFELISEqKEIVLKVWIYR 558 578889999856679****..77777788***********************97677767776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MASMRRNRLR RVTPGGNHHR QSDSPPTPPP LFAAVMLEKH ILEHKMRIPT KFAMIFGEQL 60 SEIATLTVPD GKTWHVRLKK EREKNIWLLD GFKEFMKYYS IRYGNIVLFI YQGSSEFSVR 120 ICEGIGSEID YPNHGPAGSD MGEPNLDNHN EEDTADHDDQ ISVEILDKSD EDDNEMDTND 180 DQSVESFESD SQFSHDSSDK YEEHMSDDDS MEILDPTSRG SSKGKAFDIG RVEHKSFEKS 240 KNISSPRKRG RLRKQCRSAT SMAAGIKILD MNPPTFHGSS KSKAFNIIGS VEEKSIGKVH 300 EVGGLSKSKA SNNIGHVEEE SFGRVHEVGG PSKSKAFNNI GHVEEESFGR VHEIGSSSKS 360 KAFNIIGHVE QESYRKGRPS FSPWKRDRPR KQERSASPVN SLSLFHAKRN KPKVGYNKSC 420 MIEEDADQML VPRTLSFTKS RRLEMSRETE KAVRAAIVPK LGNPSFMLIL QPYIMKGNIV 480 PLCLFRGVLD RCSTDIQLQA HNEKQRWPAK CTFTACRVRI SQGWGPFAAS ENLKEGDVCV 540 FELISEQKEI VLKVWIYRAA DYAAEPIPKR IKTE

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MASMRRNRLR RVTPGGNHHR QSDSPPTPPP LFAAVMLEKH ILEHKMRIPT KFAMIFGEQL  60
SEIATLTVPD GKTWHVRLKK EREKNIWLLD GFKEFMKYYS IRYGNIVLFI YQGSSEFSVR  120
ICEGIGSEID YPNHGPAGSD MGEPNLDNHN EEDTADHDDQ ISVEILDKSD EDDNEMDTND  180
DQSVESFESD SQFSHDSSDK YEEHMSDDDS MEILDPTSRG SSKGKAFDIG RVEHKSFEKS  240
KNISSPRKRG RLRKQCRSAT SMAAGIKILD MNPPTFHGSS KSKAFNIIGS VEEKSIGKVH  300
EVGGLSKSKA SNNIGHVEEE SFGRVHEVGG PSKSKAFNNI GHVEEESFGR VHEIGSSSKS  360
KAFNIIGHVE QESYRKGRPS FSPWKRDRPR KQERSASPVN SLSLFHAKRN KPKVGYNKSC  420
MIEEDADQML VPRTLSFTKS RRLEMSRETE KAVRAAIVPK LGNPSFMLIL QPYIMKGNIV  480
PLCLFRGVLD RCSTDIQLQA HNEKQRWPAK CTFTACRVRI SQGWGPFAAS ENLKEGDVCV  540
FELISEQKEI VLKVWIYRAA DYAAEPIPKR IKTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-21	B3 family protein