PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97134.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 338aa    MW: 37731.5 Da    PI: 8.553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-12170216455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A+++Ik+Lq
  PON97134.1 170 DHVIAERKRRQKLSQRFIALSAVVPGL-----KKMDKASVLGDAIKHIKNLQ 216
                 6999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MEDPTNLFHQ YQVDYSLDDL NFQSFSSESY SSYNPNFVPE NPQNLSNNTP LEPPQTEFER  60
PAKQLKTNSW NSCTTNNNGQ ISAKGSPSAS SSQLISFEKY ANSASATPDN KHYNNLEGSV  120
IMKPKYEPGL NGYNMVFQSS CEAQICSPNY GQVLKRAVGS MSRSPLHAQD HVIAERKRRQ  180
KLSQRFIALS AVVPGLKKMD KASVLGDAIK HIKNLQERLN TLEEQAAKKT VESVVFVKRS  240
QLSGDDETSS SDQPLSEIEA RVSGKDVLIR IHCEKHKGCL TNILNQIEKL HLTIVNCSIL  300
PFGGSTNHIT IVAQKDVEYS MKVKDLVRNL RQALLKIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175180ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-63bHLH family protein