PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97138.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 362aa MW: 40467.3 Da PI: 7.0047

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	184	230	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++YIk+Lq PON97138.1 184 DHVIAERKRREKLSQRFIALSAVVPGL-----KKMDKASVLGDAIKYIKNLQ 230 6999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
METPSAKWIS ELEMEDPTSF FHQYQVDYSL DDLNFQSFSS ESYSSYNANF VPENPRNLSS 60 NNTPLEPPQT EFERPAKQLK TNSWNSCTTN NNDQMSAKGS PSASSSQLIS FEKYTNSAAA 120 TPDNKHYNNL EGSVIMKPKD EPGLNGYNMV FQSSCEAQIC SPNHGQGVKR AVGSMSRSPL 180 HAQDHVIAER KRREKLSQRF IALSAVVPGL KKMDKASVLG DAIKYIKNLQ ERLNTLEEQT 240 AKKTVESVVF VKRSQLSGDD ETSSSDENFD SNSGQPLPEI EARVSGKDVL IRIHCEKHKG 300 CIANILNQIE KLHLTIVDSS VLQFGGSTNH ITIVAQMDVE YSMKVKDLVR NLRQALLKIN 360 RK

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

METPSAKWIS ELEMEDPTSF FHQYQVDYSL DDLNFQSFSS ESYSSYNANF VPENPRNLSS  60
NNTPLEPPQT EFERPAKQLK TNSWNSCTTN NNDQMSAKGS PSASSSQLIS FEKYTNSAAA  120
TPDNKHYNNL EGSVIMKPKD EPGLNGYNMV FQSSCEAQIC SPNHGQGVKR AVGSMSRSPL  180
HAQDHVIAER KRREKLSQRF IALSAVVPGL KKMDKASVLG DAIKYIKNLQ ERLNTLEEQT  240
AKKTVESVVF VKRSQLSGDD ETSSSDENFD SNSGQPLPEI EARVSGKDVL IRIHCEKHKG  300
CIANILNQIE KLHLTIVDSS VLQFGGSTNH ITIVAQMDVE YSMKVKDLVR NLRQALLKIN  360
RK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	ERKRRE
2	190	195	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-63	bHLH family protein