PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97178.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 218aa MW: 25319.8 Da PI: 9.4249

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	74.8	2.1e-23	15	132	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p+ frFh tdee++ +L k eg + +l+ i+evd + ++ +k ++kew f + d ky++++r++r+tk+g+Wk+tgk++e ++ v PON97178.1 15 PKWFRFHLTDEEII-THLMLKGEGMDSQLDPYIPEVDTATGTLHNY--LLKLDNKEWLFLYRPDYKYSNSNRSKRKTKTGFWKKTGKERETKD----CV 106 6779********.789999999999997779776544333..2455889*******************************9988....8 PP NAM 101 glkktLvfykgrapkgektdWvmheyr 127 g k+ Lvf+kg++p + t Wv+hey PON97178.1 107 GRKRHLVFHKGSTPG-KGTGWVIHEYY 132 *******998886.89******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSSSNAVMLS SDTMPKWFRF HLTDEEIITH LMLKGEGMDS QLDPYIPEVD TATGTLHNYL 60 LKLDNKEWLF LYRPDYKYSN SNRSKRKTKT GFWKKTGKER ETKDCVGRKR HLVFHKGSTP 120 GKGTGWVIHE YYYPQPHIDF RHQKPACVIC RLKYNARKKG RKADTPDSNV SSEASALTQE 180 VQCYDILSPQ SISQPSLVFF SIEETRRFLL NDETQAPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	2e-16	NAC family protein