PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97183.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 501aa    MW: 56631.6 Da    PI: 6.9032
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.61.8e-31171277199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefe 91 
                 f+kv tpsdv+k++rlv+pk++ae++      + ++ ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +
  PON97183.1 171 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldssNTENSKGLLLNFEDRNGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvGEsGKSR 269
                 89***************************987444457789************************************************6657778888 PP

                 .EEEEE-S CS
          B3  92 lvvkvfrk 99 
                 l++ ++r+
  PON97183.1 270 LFIDWRRR 277
                 99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MEFVQEDQDK DHHHQQQSSY YSDYKEEEEL DVYKVRKNNN KNIIDNNTAT KSTQLPLSFC  60
ASSSGHNSEQ SSINSTSCVV HHHQQPKWSS AASSSSVLPA DYHNHQSINF NKKLQLMADL  120
SLSRTNYEEN NNNNFIDDNS NNGTTSNTSP STATAGHGVW SCGSSEREHM FDKVVTPSDV  180
GKLNRLVIPK QHAEKYFPLD SSNTENSKGL LLNFEDRNGK AWRFRYSYWN SSQSYVMTKG  240
WSRFVKEKKL DAGDIVSFER GVGESGKSRL FIDWRRRPHX XXXXXHALLP PNPGSLITPL  300
VHFPTDHHHH QFQWGGGGGG GSGRRSEGLF YSLPSGISMS IPPLHHDNSM YNYNNMQYPR  360
NHNHHHPHQY QHHQQYYHGT GIRGGNDHDH VPVVIESTPA AIIGGRAPPA ASPKRLRLFG  420
VNMEYCPEQE REEEEEESTA DATMASVLSN SSNSVLQYPP YDHDRQVRLP NPSQMPIIIP  480
PEFISQKGKS SSSLSFDLDP N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.17e-63B3 family protein