PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97361.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 197aa MW: 22789.4 Da PI: 7.0705

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	7.8e-21	30	91	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ PON97361.1 30 KCGRWNPTSEQVKVLTDLFKSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 91 568***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.7e-37	30	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l+ksGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PON97361.1 30 KCGRWNPTSEQVKVLTDLFKSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 93 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MEEGMSGFCI KASSVRGTGT TSTTSGTGTK CGRWNPTSEQ VKVLTDLFKS GLRTPSTDQI 60 QKISTQLSFY GKIESKNVFY WFQNHKARER QKRRKVSIDD HDHHKDFVIL REERISSPKR 120 YAEIYHHHDD HNDHDDGQVL EPERVIETLQ LFPLNSVGVS ESEKLRYECK DTSAFPYTFE 180 TEMNHPPLDL RLSFFTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	5e-56	WOX family protein