PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97383.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 397aa MW: 45284.5 Da PI: 5.0668

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.5	2e-12	16	112	1	88
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-.TTHHHHHHHHT--TT-EEEEE.E-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgr..yvlt.kGWkeFvkangLkegDfvvFk.ldgrs 88 f+k++ ++ k++ l+l+k+ a++ + ++++ ++ +++esg s ++ +++rk +++ yvl k+W+ +v++n+LkegD+v F+ + g + PON97383.1 16 FEKIT-TKTDIKNKFLRLSKSDAKKLlptsddnKAATPSTWQINFRNESGDSLKFDCSHRKIDKSnaYVLDgKNWRWYVSENRLKEGDTVKFYkHLG-D 112 55555.666677777******9999877555668899************9965555555888769*****************93323.2 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MENNTNNGND EKKLLFEKIT TKTDIKNKFL RLSKSDAKKL LPTSDDNKAA TPSTWQINFR 60 NESGDSLKFD CSHRKIDKSN AYVLDGKNWR WYVSENRLKE GDTVKFYKHL GDGQNLFFII 120 ELEHTTADPG PGGSKAENDF PEIPSAPANL SSIPVVSAPS PSADQTRTPI NDDYIHLLEV 180 MCDDQPQGRS GFGPPPNIGD DNQLCNSDIL VGRANQSYFD QYINEYGQGL LNELDSNQNK 240 HVKPFVLSSV ESIMKIIETN HIGQVEYKDL SSQIATYWGP ISVFNQILPL NNLLEEWLGR 300 HSELEQIKKL LDDLSLLKKL VDESLGKLSE FERTKKPVDG SKTHEIIERE VEDQRKNLEF 360 AKRRLEEYTK QAEEDKSRIE EDNNHVVRRW GFTIPSN

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MENNTNNGND EKKLLFEKIT TKTDIKNKFL RLSKSDAKKL LPTSDDNKAA TPSTWQINFR  60
NESGDSLKFD CSHRKIDKSN AYVLDGKNWR WYVSENRLKE GDTVKFYKHL GDGQNLFFII  120
ELEHTTADPG PGGSKAENDF PEIPSAPANL SSIPVVSAPS PSADQTRTPI NDDYIHLLEV  180
MCDDQPQGRS GFGPPPNIGD DNQLCNSDIL VGRANQSYFD QYINEYGQGL LNELDSNQNK  240
HVKPFVLSSV ESIMKIIETN HIGQVEYKDL SSQIATYWGP ISVFNQILPL NNLLEEWLGR  300
HSELEQIKKL LDDLSLLKKL VDESLGKLSE FERTKKPVDG SKTHEIIERE VEDQRKNLEF  360
AKRRLEEYTK QAEEDKSRIE EDNNHVVRRW GFTIPSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.2	3e-09	B3 family protein