PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97607.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HB-other

Protein Properties

Length: 540aa MW: 60668.4 Da PI: 6.5491

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.9e-20	19	74	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+ +Le+++++++yp++e++ eLA++lgLte+q++ WF+ rR k+k+ PON97607.1 19 KKRRLKTPSQVMALEKFYNEHKYPTEEMKSELAEQLGLTEKQISGWFCHRRLKDKR 74 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MEESSEAHSE ENKASQDNKK RRLKTPSQVM ALEKFYNEHK YPTEEMKSEL AEQLGLTEKQ 60 ISGWFCHRRL KDKRLSRDET CANGRQDRLS GVIQDLGSGL GQDSCGSTKH VDYRHVDPRE 120 VESRRLYGHD FPAADLINDN RSHYTERVSG LDDTSSESSS SLQDRFISQT EDPHSMETSR 180 YLIQDGPIAP LSSRGTRNMG YKPSGYLKVK GEIENAAITA VKRQLGRQYQ EDGPPLGVEF 240 EPLPPGAFES PIRDPIHEPY YVGNPVLSHS PDISGVKRQT SPSTRYEVHN SKLSSRDSYL 300 QEASGFLQGV DHQEARPGNQ SKQKSTYIDH TSSFPGRHSS LDKYDDSTYN TNRSRKKSSK 360 HGVEGMASDS FLNHHGHYGG KIASRQALSS AHEDDDVNHH GHYGGKIASR QALSSAHEDD 420 DVSPEIVQRS EYLKFKPSRS TQNYFEAPDM EERGISTMIA QEDKFIGEGK ARKDVKVKMK 480 HVNEMTVAKR VRADFSREEN VTSSSFAEML PRKNHTKGSA LEMPSSFSED ETAETSSSED

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MEESSEAHSE ENKASQDNKK RRLKTPSQVM ALEKFYNEHK YPTEEMKSEL AEQLGLTEKQ  60
ISGWFCHRRL KDKRLSRDET CANGRQDRLS GVIQDLGSGL GQDSCGSTKH VDYRHVDPRE  120
VESRRLYGHD FPAADLINDN RSHYTERVSG LDDTSSESSS SLQDRFISQT EDPHSMETSR  180
YLIQDGPIAP LSSRGTRNMG YKPSGYLKVK GEIENAAITA VKRQLGRQYQ EDGPPLGVEF  240
EPLPPGAFES PIRDPIHEPY YVGNPVLSHS PDISGVKRQT SPSTRYEVHN SKLSSRDSYL  300
QEASGFLQGV DHQEARPGNQ SKQKSTYIDH TSSFPGRHSS LDKYDDSTYN TNRSRKKSSK  360
HGVEGMASDS FLNHHGHYGG KIASRQALSS AHEDDDVNHH GHYGGKIASR QALSSAHEDD  420
DVSPEIVQRS EYLKFKPSRS TQNYFEAPDM EERGISTMIA QEDKFIGEGK ARKDVKVKMK  480
HVNEMTVAKR VRADFSREEN VTSSSFAEML PRKNHTKGSA LEMPSSFSED ETAETSSSED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	24	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-95	HB-other family protein