PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97766.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 199aa MW: 22412.1 Da PI: 9.5514

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	1e-31	120	178	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrC++++C+vkk+++r ++d ++v++tYeg Hnh+ PON97766.1 120 LDDGYRWRKYGQKTVKNSSHPRSYYRCSHHTCSVKKQIQRLSKDSSIVVTTYEGIHNHP 178 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MDEEIPLSQC PLSFPNTPNS LPSTSSSVHL PFEYSQFSLE VLSWLGLLSG STNIDCDNYT 60 QKLSSSPSDQ SFKAKNTSGS KLGDNKNNNN GGENKAKVGR KKKAIPQRIS FHTRSDDDVL 120 DDGYRWRKYG QKTVKNSSHP RSYYRCSHHT CSVKKQIQRL SKDSSIVVTT YEGIHNHPCE 180 KLMETLGPLL KQLQFLSRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	8e-60	WRKY family protein