PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98775.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SRS

Protein Properties

Length: 225aa MW: 24821.6 Da PI: 9.8597

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	172.6	1.9e-53	51	201	3	152
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssaeskke 99 gt +C dCGn+ak+dC ++RCRtCCk+r+f C+thv+stWvpa++rr + ++++sk+ + + +++as+++ +++++ ++ +s +s ++ PON98775.1 51 GGTRACADCGNRAKRDCGFSRCRTCCKARAFPCSTHVRSTWVPASRRRRNGSSGSSSASKRPRLHecQTDASHSHTFNSNNAITTPKSFDAPSIHQDAI 149 57899***************************************99986665555554444333367777777777777888888888888876654 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGl 152 ++slP++v+++a+frc rv+++ dg+ e+aYq +v i+Ghvf+G+LydqG+ PON98775.1 150 -FKQSLPNKVRAPAIFRCHRVTAIGDGKVEIAYQVTVRISGHVFQGFLYDQGV 201 .4566*********************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MNQQQTQKQP PPPHPSPSND AVFSYLTTSL RKWQRHQSDV VETDDDVVVR GGTRACADCG 60 NRAKRDCGFS RCRTCCKARA FPCSTHVRST WVPASRRRRN GSSGSSSASK RPRLHECQTD 120 ASHSHTFNSN NAITTPKSFD APSIHQDAIF KQSLPNKVRA PAIFRCHRVT AIGDGKVEIA 180 YQVTVRISGH VFQGFLYDQG VFENNGDYSS SPIVVLSTPN PTSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	9e-35	SRS family protein