PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99204.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 685aa MW: 75285.4 Da PI: 6.0893

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89	4.4e-28	206	259	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl PON99204.1 206 KPRVVWSVELHRKFVGAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 259 79*****************.******************************8 PP
2	Myb_DNA-binding	35.7	1.9e-11	208	258	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +++t++++ s++qky+ PON99204.1 208 RVVWSVELHRKFVGAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 258 678******************************99***********7 PP
3	Response_reg	79.5	1.1e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ + ll+++l++ +y +v++++++ +al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + Ga PON99204.1 20 VLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAVSALNMLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDHKLVMKGITHGAC 114 799******************.***********888888***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON99204.1 115 DYLLKPVRIEELKN 128 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MTVEQRVDDP RDQFPVGMRV LAVDDDPTCL LLLETLLRRC QYHVTTTSQA VSALNMLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DHKLVMKGIT HGACDYLLKP 120 VRIEELKNIW QHVIRRKKND SKNPKNSENR DKSYGASGEG EPGSAGTGNS DQNGKVNKKR 180 KDQNDDDEDE HDENGNDNDD PSTQKKPRVV WSVELHRKFV GAVNQLGIDK AVPKKILDLM 240 NVEKLTRENV ASHLQKYRLY LKRISCVANQ QANMVAALGS SDSSYLRMGS MNGLGNFNAL 300 TGPMQFQNPA FRSFPPGGMI GRLNSPAGLG LRCLPSSGMI QLGHAQNSSS SNDQMKFHQA 360 TLPGNHDGSI IQGMPMPFEL ERQHSKGVQH IGDLSTGLDD TTVFPLSTGL PEAKITTNNS 420 SSNGLGVTNN MLMLGHSHDT QGGREFGNQS SVSLASLKSE YGSSLQDSGR CTDNWSSAAQ 480 PSGFQSNSFP LSDRYKQSTM HPSIPRDNNM PVMASQIGGN QFDVSSMSSV SVRPHDSITD 540 MQCQTSAIDN GALIQGWDNH KQDPSYRPNI MSSSINSLMP VNGGAMGPLD QSLELKNQIF 600 HRSMDFNSMG QSDYVDPLMA KYDEVEKSTM ETLKLKQEYL MGQQPHGGYI PNNYGSLGDV 660 VSAMMKQEQD RAEGDFDAFS LGTSI

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MTVEQRVDDP RDQFPVGMRV LAVDDDPTCL LLLETLLRRC QYHVTTTSQA VSALNMLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DHKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKND SKNPKNSENR DKSYGASGEG EPGSAGTGNS DQNGKVNKKR  180
KDQNDDDEDE HDENGNDNDD PSTQKKPRVV WSVELHRKFV GAVNQLGIDK AVPKKILDLM  240
NVEKLTRENV ASHLQKYRLY LKRISCVANQ QANMVAALGS SDSSYLRMGS MNGLGNFNAL  300
TGPMQFQNPA FRSFPPGGMI GRLNSPAGLG LRCLPSSGMI QLGHAQNSSS SNDQMKFHQA  360
TLPGNHDGSI IQGMPMPFEL ERQHSKGVQH IGDLSTGLDD TTVFPLSTGL PEAKITTNNS  420
SSNGLGVTNN MLMLGHSHDT QGGREFGNQS SVSLASLKSE YGSSLQDSGR CTDNWSSAAQ  480
PSGFQSNSFP LSDRYKQSTM HPSIPRDNNM PVMASQIGGN QFDVSSMSSV SVRPHDSITD  540
MQCQTSAIDN GALIQGWDNH KQDPSYRPNI MSSSINSLMP VNGGAMGPLD QSLELKNQIF  600
HRSMDFNSMG QSDYVDPLMA KYDEVEKSTM ETLKLKQEYL MGQQPHGGYI PNNYGSLGDV  660
VSAMMKQEQD RAEGDFDAFS LGTSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-130	ARR-B family protein