PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99250.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 171aa    MW: 18175.3 Da    PI: 5.7872
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-171666155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++k +g+Wv+eIr+p   g + +r +lg++ tae Aa a++ a  +l+ 
  PON99250.1 16 TKYKGVRRRK-WGKWVSEIRVP---G-TqTRLWLGSYATAEAAAVAHDVAFYCLRR 66
                69*****998.**********8...3.35********************9999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSYDSEESGS SSAQATKYKG VRRRKWGKWV SEIRVPGTQT RLWLGSYATA EAAAVAHDVA  60
FYCLRRPSTL ETLNFPLMLP AAGLAADMSP RSVQKAASDA GMAVDARVQL SSASTSPGTE  120
RKVSGVQSGK FPSLDHQALF LGDVGENCGT WEGGEVGPNG EALSISIEDY L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.19e-38ERF family protein