PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99471.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 176aa MW: 19863.2 Da PI: 10.9293

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.1	2e-20	27	88	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+++ r p+ae++++++++l +++ ++V++WFqN++a+e++ PON99471.1 27 STRWTPTTDQIRILKELYYNngVRSPTAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88 58**************98678***********************************97 PP
2	Wus_type_Homeobox	115.3	3e-37	26	90	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL+ely+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ PON99471.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MEAQQNDDGG SSGGKGSSGG FLCRQSSTRW TPTTDQIRIL KELYYNNGVR SPTAEQIQRI 60 SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTTTTTAST TNDHNNQTPM QRGIMLPTAW 120 KPDHHQDHHQ SFNHNIKYSP VVSSTAPNSS ATSMLGGTLV LKLKLNGQLT RVTLRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-42	WOX family protein