PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99505.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

DBB

Protein Properties

Length: 258aa MW: 29106.4 Da PI: 7.045

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.4e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ fC ++ lC+ C ++ H PON99505.1 4 LCDACESAAAIVFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	26.2	1.6e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e ++C+ +e+ ++ ++Ce +++ lC +C + H g H PON99505.1 52 EVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGgkrtH 91 789***************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MRTLCDACES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLANP SEVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGS LEETASQPVL 120 DRAEARRGTN QPSSKMTAEE NQQQNHRVSP VRIPEANADG HTKRDTKMID LNIKPHKLHE 180 QSSNNQKLSI ALPVHLTNMG LSFFRTNEEL HNLESWLLHD KLEWRALYGE IKLSLDACFI 240 QVRVWSIEVC RVMIFPLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-79	DBB family protein