PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99521.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 341aa    MW: 37092.3 Da    PI: 6.2692
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.91.4e-18258292135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  PON99521.1 258 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 292
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MECVEGALKT SFRKEMAMKP TPQAVFDDLL GLNGQNGVSS DDFFVDDLLN FSNEDEPEVV  60
EEEQEEEEHK GLASASPLKP YKTEPVQENS NPTSTSFSPK DEFGPVPTTE LSVPADELAN  120
LEWLSHFVED SFSEFSTPYL AGVSTEKPKN PTGKQPQEPE RSVSEKPCFT TPVPAKARSK  180
RARTGGRVWS LGSPSFTESS SSSTSSSSSS SPSSSWLVYP TQNLDPAGSV EKPPAKKPKK  240
KPSLDLSGPG TGQPTRRCSH CGVQKTPQWR TGPLGAKTLC NACGVRFKSG RLLPEYRPAC  300
SPTFSSELHS NHHRKVLEMR RKKENVTGPE SGFGPPVVPS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-89GATA family protein