PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99532.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SRS

Protein Properties

Length: 373aa MW: 40282.9 Da PI: 6.8603

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	230.6	2.8e-71	152	301	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaass.kaaasaaeaaskrkrelkskkqsalsstklssaeskkel 100 g++sCqdCGnqakkdC+h+RCRtCCksrg+dC+thvkstWvpa+krrerqqq+ ++ + ++++++ ++++kr r++ ++ + s++ ++++++ l PON99532.1 152 GGGVSCQDCGNQAKKDCVHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQQLSSLQqQQQQQQLQQQPKRLRDN---NNPLMISSSRLQTNTSSGL 247 5789*********************************************777666544044444455555555554...444444444455666779 PP DUF702 101 etsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 e+ ++P+evss+avfrcvrvss+dd+++++aYqtav+igGhvfkGiLyd+G+e+ PON99532.1 248 EVGNFPAEVSSPAVFRCVRVSSIDDNDDQYAYQTAVNIGGHVFKGILYDHGPET 301 ****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MAGFFSLGSS TSTPPAAAGG RGSTQEEDDD NNNNQNQPPT GIAAPPHNPE TFFWYNVKNS 60 NNHDQHQTHH TTTTFELWQQ EQQQAALLHL QTRAHHHHHQ DLYSSAAALG VGPSSYRSVG 120 TGAASITVDS SDDHHSSSAR FMMMRSSSSG GGGGVSCQDC GNQAKKDCVH MRCRTCCKSR 180 GYDCQTHVKS TWVPASKRRE RQQQQLSSLQ QQQQQQQLQQ QPKRLRDNNN PLMISSSRLQ 240 TNTSSGLEVG NFPAEVSSPA VFRCVRVSSI DDNDDQYAYQ TAVNIGGHVF KGILYDHGPE 300 TTNYNMAGET SSGGGGGNQV QPLDLITVAA TATAAGTAVT EATPSAAFDP SSLYPPPLNT 360 YIAGTQFFLP PRS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MAGFFSLGSS TSTPPAAAGG RGSTQEEDDD NNNNQNQPPT GIAAPPHNPE TFFWYNVKNS  60
NNHDQHQTHH TTTTFELWQQ EQQQAALLHL QTRAHHHHHQ DLYSSAAALG VGPSSYRSVG  120
TGAASITVDS SDDHHSSSAR FMMMRSSSSG GGGGVSCQDC GNQAKKDCVH MRCRTCCKSR  180
GYDCQTHVKS TWVPASKRRE RQQQQLSSLQ QQQQQQQLQQ QPKRLRDNNN PLMISSSRLQ  240
TNTSSGLEVG NFPAEVSSPA VFRCVRVSSI DDNDDQYAYQ TAVNIGGHVF KGILYDHGPE  300
TTNYNMAGET SSGGGGGNQV QPLDLITVAA TATAAGTAVT EATPSAAFDP SSLYPPPLNT  360
YIAGTQFFLP PRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-69	SRS family protein