PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99826.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 238aa MW: 27417.8 Da PI: 9.8253

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.5e-16	14	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l+++v+ +G g+W+t+++ g++R +k+c++rw +yl PON99826.1 14 NLWKPEEDLILKKYVEAHGEGNWATVSQQSGLKRGGKSCRLRWKNYL 60 56***************************99**********97 PP
2	Myb_DNA-binding	56.4	6.9e-18	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l PON99826.1 66 RGRMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MENNRVKKQP PKKNLWKPEE DLILKKYVEA HGEGNWATVS QQSGLKRGGK SCRLRWKNYL 60 RPNIKRGRMS QEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKRSPLGKR 120 KHVDSNDHQN DTNSTETTNK KSKIHTYPML SIDTQKNPTK ESNGKKEEGS TSLLNPLMTD 180 TKSFNYDIES PFMATNTSTF VFDDEPLIAY MDSFALFEGF GYTQGENYAE LGMQSVSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-67	MYB family protein